% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/egseaData.R
\docType{data}
\name{msigdb}
\alias{msigdb}
\title{MSigDB Gene Set Collections}
\format{list}
\source{
Aravind Subramanian, Pablo Tamayo, Vamsi K. Mootha, Sayan Mukherjee, Benjamin L. Ebert, Michael A. Gillette, Amanda Paulovich, Scott L. Pomeroy, Todd R. Golub, Eric S. Lander, and Jill P. Mesirov
Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
PNAS 2005 102 (43) 15545-15550
}
\description{
Gene set collections from the MSigDB database
}
\details{
Procedure \cr 
1. The current msigdb_vx.xml file was downloaded. \cr 
2. It was parsed using xmlParse() and then converted to list using xmlToList()
3. The resulting list was written to an RData file using save(). \cr 
This dataset is mainly used to extract MSigDB gene set annotation and the human gene set 
collections.
}
\seealso{
Invoke egsea.data() to find out the current version and latest download/update date.
}

