Changes in version 0.99.0 (23 Sep, 2022) + Submitted to Bioconductor Changes in version 0.99.9 (28 Sep, 2022) + Passed checks Changes in version 0.99.10-12 (30 Sep-2 Oct, 2022) + Addressed notes/review raised by Bioconductor reviewer, 1st round (link: https://github.com/Bioconductor/Contributions/issues/2781) Changes in version 0.99.13-0.99.14 (04 Oct, 2022) + More unit tests + Automatic x-axis ordering (by hclust) of labels in get_cat_tiles and get_num_tiles turned off Changes in version 0.99.15-0.99.16 (09 Oct, 2022) + remove unnecessary dependency from DESCRIPTION + added vignette demonstrating how to get the main input of scBubbletree + minor bugfixes Changes in version 0.99.17 (10 Oct, 2022) + package passed review, added to devel Changes in version 0.99.18 (11 Oct, 2022) + renaming function get_bubbletree_louvain -> get_bubbletree_graph + renaming parameter louvain_algorithm -> algorithm + contact email changed + vignette adjusted -> inputs vignette removed + function name changed in unit tests, namespace, man files, etc. Changes in version 1.1.8 (7 March, 2023) + Manhattan distance metric implemented + other linkage functions for clustering implemented + tracking timestamps for clustering, bubbletree construction, end Changes in version 1.3.1 (20 Jun, 2023) + vignette checks, minor modification Changes in version 1.7.2 (5 Jun, 2024) + bubbletree comparison function get_bubbletree_comparison + main functions simplified and defaults changed + documentation updated Changes in version 1.7.21 (3 Sep, 2024) + new abstract + new vignette + new function: get_num_cell_tiles Changes after version 1.71.21 (17 Sep, 2024) + scBubbletree paper accepted in BMC bioinformatics Changes after version 1.71.22 (20 Sep, 2024) + simplified tree visualizations added in outout as object: tree_simple