massiR

This is the development version of massiR; for the stable release version, see massiR.

massiR: MicroArray Sample Sex Identifier


Bioconductor version: Development (3.20)

Predicts the sex of samples in gene expression microarray datasets

Author: Sam Buckberry

Maintainer: Sam Buckberry <sam.buckberry at adelaide.edu.au>

Citation (from within R, enter citation("massiR")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("massiR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("massiR")
massiR_Example PDF R Script
Reference Manual PDF

Details

biocViews Classification, Clustering, GeneExpression, Microarray, QualityControl, Software
Version 1.41.0
In Bioconductor since BioC 2.14 (R-3.1) (10.5 years)
License GPL-3
Depends cluster, gplots, diptest, Biobase, R (>= 3.0.2)
Imports
System Requirements
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Suggests biomaRt, RUnit, BiocGenerics
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package massiR_1.41.0.tar.gz
Windows Binary massiR_1.41.0.zip
macOS Binary (x86_64) massiR_1.41.0.tgz
macOS Binary (arm64) massiR_1.41.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/massiR
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/massiR
Bioc Package Browser https://code.bioconductor.org/browse/massiR/
Package Short Url https://bioconductor.org/packages/massiR/
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