codelink
This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see codelink.
Manipulation of Codelink microarray data
Bioconductor version: 3.8
This package facilitates reading, preprocessing and manipulating Codelink microarray data. The raw data must be exported as text file using the Codelink software.
Author: Diego Diez
Maintainer: Diego Diez <diego10ruiz at gmail.com>
Citation (from within R, enter
citation("codelink")):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("codelink")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("codelink")| Codelink Intruction | R Script | |
| Codelink Legacy | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | DataImport, Microarray, OneChannel, Preprocessing, Software |
| Version | 1.50.0 |
| In Bioconductor since | BioC 1.8 (R-2.3) (18 years) |
| License | GPL-2 |
| Depends | R (>= 2.10), BiocGenerics(>= 0.3.2), methods, Biobase(>= 2.17.8), limma |
| Imports | annotate |
| System Requirements | |
| URL | https://github.com/ddiez/codelink |
| Bug Reports | https://github.com/ddiez/codelink/issues |
See More
| Suggests | genefilter, parallel, knitr |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | AgiMicroRna, MAQCsubset |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | codelink_1.50.0.tar.gz |
| Windows Binary | codelink_1.50.0.zip |
| Mac OS X 10.11 (El Capitan) | codelink_1.50.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/codelink |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/codelink |
| Bioc Package Browser | https://code.bioconductor.org/browse/codelink/ |
| Package Short Url | https://bioconductor.org/packages/codelink/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.8 | Source Archive |