KOdata

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see KOdata.

LINCS Knock-Out Data Package


Bioconductor version: 3.16

Contains consensus genomic signatures (CGS) for experimental cell-line specific gene knock-outs as well as baseline gene expression data for a subset of experimental cell-lines. Intended for use with package KEGGlincs.

Author: Shana White

Maintainer: Shana White <vandersm at mail.uc.edu>

Citation (from within R, enter citation("KOdata")):

Installation

To install this package, start R (version "4.2") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("KOdata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF
NEWS Text
LICENSE Text

Details

biocViews CancerData, ExperimentData, ExpressionData, Homo_sapiens_Data
Version 1.24.0
License MIT + file LICENSE
Depends R (>= 3.3.0)
Imports
System Requirements
URL
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Suggests
Linking To
Enhances
Depends On Me KEGGlincs
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package KOdata_1.24.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/KOdata
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/KOdata
Package Short Url https://bioconductor.org/packages/KOdata/
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