Cairns J, Freire-Pritchett P, Wingett SW, Dimond A, Plagnol V, Zerbino D, Schoenfelder S, Javierre B, Osborne C, Fraser P, Spivakov M (2016). “CHiCAGO: Robust Detection of DNA Looping Interactions in Capture Hi-C data.” Genome Biology, 17, 127. R package version 4.0.0.