.createPatternFile	dot-createPatternFile
.generateColors	dot-generateColors
.getBarcodeFilter	dot-getBarcodeFilter
.getDiagonalIndex	dot-getDiagonalIndex
.getMinDist	dot-getMinDist
.getWobblePos	dot-getWobblePos
.hex2rgbColor	dot-hex2rgbColor
.revComp	dot-revComp
.revComp_EqLength	dot-revComp_EqLength
.revComp_UneqLength	dot-revComp_UneqLength
.testDirIdentifier	dot-testDirIdentifier
asBCdat	asBCdat
BCdat	BCdat-class
BCdat-class	BCdat-class
BC_dat	BC_dat
BC_dat_EC	BC_dat_EC
com_pair	com_pair
createGDF	createGDF
errorCorrection	errorCorrection
error_correction_circlePlot	error_correction_circlePlot
error_correction_clustered_HDs	error_correction_clustered_HDs
error_correction_treePlot	error_correction_treePlot
extractBarcodes	extractBarcodes
genBaRcode_app	genBaRcode_app
generateKirchenplot	generateKirchenplot
generateTimeSeriesData	generateTimeSeriesData
getBackbone	getBackbone
getBackboneSelection	getBackboneSelection
getLabel	getLabel
getReads	getReads
getResultsDir	getResultsDir
ggplotDistanceGraph	ggplotDistanceGraph
ggplotDistanceGraph_EC	ggplotDistanceGraph_EC
hybridsIdentification	hybridsIdentification
plotClusterGgTree	plotClusterGgTree
plotClusterTree	plotClusterTree
plotDistanceIgraph	plotDistanceIgraph
plotDistanceVisNetwork	plotDistanceVisNetwork
plotDistanceVisNetwork_EC	plotDistanceVisNetwork_EC
plotNucFrequency	plotNucFrequency
plotQualityScoreDis	plotQualityScoreDis
plotQualityScorePerCycle	plotQualityScorePerCycle
plotReadFrequencies	plotReadFrequencies
plotSeqLogo	plotSeqLogo
plotTimeSeries	plotTimeSeries
plotVennDiagram	plotVennDiagram
prepareDatObject	prepareDatObject
processingRawData	processingRawData
qualityFiltering	qualityFiltering
readBCdat	readBCdat
setBackbone	setBackbone
setLabel	setLabel
setReads	setReads
setResultsDir	setResultsDir
