mrcImageUnexpectedMassFromPDB
Usage
Usage: mrcImageUnexpectedMassFromPDB
Options:
[-i[nput] In (NULL ).as(inFile ) ] :Essential :InputDataFile
[-p[dbFile] InPDB (NULL ).as(inFile ) ] :Essential :InputPDBDataFile
[-o[utput] Out (NULL ).as(outFile ) ] :Essential :OutputDataFile
[-T[hres] Thres (0.0 ).as(Real ) ] :Essential :ThresHold
[-D[ata] Data (0.0 ).as(Real ) ] :Essential :AssinedData
[-M[ode] AtomMode (1 ).as(Integer ) ] :Optional :AtomMode
[-r[adius] radius (3.4 ).as(Real ) ] :Optional :Radius
[-c[onfig] configFile (NULL ).as(inFile ) ] :Optional :ConfigurationFile
[-m[ode] mode (0 ).as(Integer ) ] :Optional :Mode
>>> Mode:
0: Origin is BottomLeft.
1: Origin is Center.(Helix)
2: Origin is Center.(3D Single)
3: Origin is shown by StartN.
16: MaxIsProtein : Default: MinIsProtein
>>> Algorism
If MinIsProtein mode,
if density>Thres
then
density := density
else
density := Data
endif
>>> AtomMode
0: Nearest Voxel -> Data
1: Nearest and 6-linked voxel -> Data
2: Specified spheres(Outside) -> Data
3: Inside of Specified spheres -> Data
2: Outside of Specified spheres -> Data