mrcImageToNAMDConstantForces

Usage

Usage: mrcImageToNAMDConstantForces
Options:
    [-i[nput]            In                  (NULL      ).as(inFile              ) ] :Essential :Input:MRC
    [-ip[db]             InPDB               (NULL      ).as(inFile              ) ] :Essential :Input:PDB
    [-o[utput]           Out                 (stdout    ).as(outFile             ) ] :Optional  :Output: PDB with Constant Force
    [-w[eight]           Weight              (1.0       ).as(Real                ) ] :Optional  :Input: Weight for Constant Force
    [-s[calingFactor]    ScalingFactor       (1.0       ).as(Real                ) ] :Optional  :Input: Scaling Factor for Constant Force
    [-C[ontour]          Contour             (0.0       ).as(Real                ) ] :Optional  :Input: Contour[if density>Contour, force=0]
    [-R[otatemode]       Rotate              (0         ).as(Integer             ) ] :Optional  :Input: RotateMode
    [-RW[eight]          RWeight             (0.1       ).as(Real                ) ] :Optional  :Input: RotateWeight
    [-S[eed]             Seed                (0.0       ).as(Real                ) ] :Optional  :Input: Seed
    [-nowat[er]                                                                    ] :Optional  :No force for WAT (water residue) 
    [-c[onfig]           configFile          (NULL      ).as(inFile              ) ] :Optional  :ConfigurationFile
    [-m[ode]             mode                (0         ).as(Integer             ) ] :Optional  :Mode
----- Additional Usage -----
More Density is lower potential.