pdbNAMDRestraintCreate
Usage
Usage: pdbNAMDRestraintCreate
Options:
[-i[nput] In (NULL ).as(inFile ) ] :Essential :Input:PDB
[-r[efrence] Ref (NULL ).as(inFile ) ] :Essential :Input:PDB
[-o[utput] Out (stdout ).as(outFile ) ] :Optional :Output: NAMD Restraint
[-O[utput] Out2 (stdout ).as(outFile ) ] :Optional :Output: NAMD PDB Force
[-kf Kf (1.0 ).as(Real ) ] :Optional :Input: Kf kcal/mol/A^2
[-autokf AutoKf (1.0 ).as(Real ) ] :Optional :Input: Kf kcal/mol for averaged length
[-seg[name] SegName (EXAMPLE ).as(String ) ] :Optional :Input: segment name
[-c[onfig] configFile (NULL ).as(inFile ) ] :Optional :ConfigurationFile
[-m[ode] mode (0 ).as(Integer ) ] :Optional :Mode
----- Additional Usage -----
-autokf is prior to -kf.