2019-04-04 23:31 xia * Update to version 2.2-1 * hglm was archived on CRAN due to dependency hglm.data being archived, the latter was fixed by updating maintainer email address and sp package dependency 2018-08-24 11:16 xia * Update to version 2.2-0 * All rBind/cBind replaced by rbind/cbind due to the change in Matrix package (hglm was archived on CRAN for a few weeks due to this) * Minor Rd files for inverse.sqrt and inverse.gamma added due to CRAN requirement * http link changed to https 2015-08-21 13:02 xia * Bug fixed for inverse.gamma() and inverse.sqrt() links 2015-05-13 21:47 xia * Bug fixed for two random effects variance components * Bug fixed for EQL1 HL.correction checking 2015-04-20 18:06 lrn * Update to version 2.1-0 * Improved computational stability of likelihoods * log-likelihood values reported instead of -2 times log-likelihood * Likelihood computations enabled for several random effects coming from different distributions * Bug in likelihood computations for non-Gaussian outcomes corrected * logLik function added. * Warning messages added for NA in y, X, Z and X.disp * Accuracy of EQL1 computations improved in the GLM.MME function * all(sigma2u/(sum(sigma2u)+sigma2e) < (1-1e-4)) added to check for convergence in the hglm.default function 2015-01-30 10:28 xia * Update to version 2.0-12 * hglm2() number of variance components bug fixed * Starting value checking for multiple random effects bug fixed * Vignette updated * Large hat-values checking improved 2014-10-30 16:24 xia * Update to version 2.0-11 * Vignette compressed via qpdf 2014-10-23 11:39 xia * Update to version 2.0-10 * SAR() family for the random effects added * method = 'HL11' changed to method = 'EQL1' * Convergence issues fixed for internal Gamma GLM with inverse link * Bug fixed for g1 when starting values are provided 2014-09-26 22:53 xia * Update to version 2.0-9 * cAIC bug fixed in the likelihood calculation * Maintainer address updated to xia (dot) shen (at) ki (dot) se 2014-07-23 10:20 xia * Update to version 2.0-8 * Data stored separately according to CRAN rules 2014-07-22 15:30 xia * Update to version 2.0-7 * Vignette updated * HL(1,1) method bug fixed for family checking 2014-05-28 13:30 xia * Update to version 2.0-6 * likelihood calculation bug fixed for model without structured dispersion * HL(1,1) method bug fixed for Gamma family 2014-01-21 16:10 xia * Update to version 2.0-5 * likelihood calculation numerical bug fixed for pvh 2014-01-20 12:45 xia * Update to version 2.0-4 * CAR family random effects calculation bug fixed * lrt() function p-value bug fixed 2014-01-13 12:45 xia * Update to version 2.0-3 * Loading bug fixed for CRAN 2014-01-01 17:39 xia * Update to version 2.0-2 * Maintainer changed to Xia Shen * lrt() function added for testing variance components via likelihood-ratio test * New vignette compiled using knitr! 2013-11-21 19:50 xia * Update to version 2.0-1 * svd() to eigen() decomposition bug fixed * likelihood calculation upgraded 2013-10-20 19:50 xia * Update to version 2.0-0 * Spatial MRF model implemented in a smart way! CAR() family for random effects added * Different families allowed for multiple random effects terms! * HL(1,1) correction implemented - much better bias correction for binomial & Poisson families! * Likelihood calculation upgraded * Fixed effects model implemented for the variance component of random effects * Scottish lip cancer dataset included * Link function bug fixed for Gamma-distributed random effects 2013-05-02 15:45 xia * Update to version 1.2-8 * CRAN version is checked while loading the package * internal bigRR() updated according to the bigRR package 2013-05-02 15:45 xia * Update to version 1.2-7 * Default maxit = 50 instead of 20 * From now on, we keep track of our users 2013-03-11 15:35 xia * Update to version 1.2-6 * Fixed verbose and likelihood bugs in hglm.formula * Fixed likelihood bugs for structured residual variance * Fixed likelihood bugs for hglm2() * Fixed bug in user-defined initial values for fitting multiple random effects terms in hglm2() * More in examples 2013-02-25 00:25 xia * Update to version 1.2-5 * Option "calc.like" added for computing h-likelihood, profile likelihood and conditional AIC * Option "bigRR" added for fitting p >> n problems as random effects * Discussion forum and bug reports links are given in the package description 2013-02-16 18:40 xia * Update to version 1.2-4 * Default convergence criterion changed to 1e-6 * Option "print.ranef" added to print and summary functions, controlling whether random effects should be printed or not in the print and summary functions * Option "verbose" added so that some results for each iteration can be printed * This "ChangeLog" added 2013-02-15 13:40 xia * Update to version 1.2-3 * Start-up message command renewed * Xia's email address updated 2011-07-04 13:25 xia * Update to version 1.2-2 * Fitting multiple correlated random effects * hglm2() function added for use like lme4-type formula * Sparse matrix technique used * Citation information added