Version 1.2.3 (30-03-2021)
- Correction Authors@R
- Ajout tag \value in function which do not return any value

Version 1.2.2 (29-03-2021)
- Correction CITATION file (including new URL)
- Add reference in description field in THE DESCRIPTION file

Version 1.2.1 (24-03-2021)
- Remove setwd in functions
- Add Ilari Scheinin as contributor
- Add dontrun tag for examples
- Update vignette to write files in tempdir() directory by default
- add on.exit() to preserve par() settings in functions

Version 1.2 (18-06-2020)
- remove cghseg fonctionnalities for CRAN submission

Version 1.1.8 (16-01-2020)
- cghseg moved to enhances section

Version 1.1.7 (14-01-2020)
- cghseg conditionnally installed via drat repo

Version 1.1.6 (23-08-2018)
- cghseg Namespace imported conditionally on its availability via requireNamespace

Version 1.1.5 (22-08-2018)
- Update maintener
- cghseg is now optionnal

Version 1.1.4 (09-09-2015)
- Add importFrom in MPAgenomics-package.R to complete NAMESPACE file

Version 1.1.3 (08-01-2015)
- Add \donttest in MPAgenomics-package.R to prevent automatic opening of a pdf viewer during a R CMD check.

Version 1.1.2 (29-10-2014)
- Changes for HDPenReg 0.90
- Add knee to SNPselection
- update vignette

Version 1.1.1 (09-10-2014)
- Add HDPenReg in Imports field
- Add spikeslab in markerSelection function
- Bugs correction in markerSelection for logistic loss
- Default value correction for cv.glmnet in markerSelection
- Code factorization in SNPselection.R

Version 1.1.0 (23-07-2014)
- Vignette update
- Minor bugs correction 

Version 1.0.5 (24-06-2014)
- Vignette corrections for allele B fraction segmentations
- Correction of getFracBsignal and segFracB 

Version 1.0.4 (19-06-2014)
- Vignette bibtex correction
- Modification of allele B fraction segmentation for single study case
- Modification of slope heuristic method for cghseg

Version 1.0.3 (15-05-2014)
- Add cghseg method for segmentation.
- No more export of PELT and PELTaroma. Use segmentation and segmentationAroma instead.
- Upgrade all documentations with roxygen2 4.0.0
- Modification of the installation instruction in the vignette and in the code

Version 1.0.2 (13-05-2014)
- BUG FIX : findGender now use normal sample instead of tumor sample

Version 1.0.1 (17-03-2014)
- Minor changes in vignette and documentation.
- First stable version to be submitted to the CRAN

Version 0.41.3 (14-03-2014)
- EVOLUTION : Modification of aroma architecture management
    - CreateEmptyArchiteture no more exported
    - Creation of new data folders and chip folders by addData and addChip function
- Changes in documentation to be more consistent with vignette
- Changes in vignette
    - Maths formula of Lasso
    - Minor changes

Version 0.41.2 (13-03-2014)
- BUG FIX : SNP filtering for cytoscan_HD microarray
- Changes in vignette
    - Citations
    - minor changes

Version 0.41.1 (06-03-2014)
- Adding citation chapter in Vignette

Version 0.41 (06-03-2014)
- force rewrite of graphics with tumorboost
- Minor corrections in Vignette

Version 0.40.10 (05-03-2014)
- BUG FIX : Management of Normal-tumor pairs for tumorboost.
- Correcting some vignette examples. 

Version 0.40.9 (28-02-2014)
- Correction of the starting example section (1.3) of the vignette : adding parameter"loss=linear" in markerSelection.

Version 0.40.8 (27-02-2014)
- BUG FIX : correction of the "unable to evaluate fonction with inital parameter" bug. Correction applied in private.R .minusEloglikreg function

Version 0.40.7 (27-02-2014)
- New version to force r-forge to recompile

Version 0.40.6 (25-02-2014)
- BUG FIX : Tags mangement : checking NULL value before checking character 
- rename ChangeLog into NEWS

Version 0.40.5 (25-02-2014)
- Adding tag management for chip files
- Vignette update

Version 0.40.4 (24-02-2014)
-Adding copyrights and authors
-Adding citation file
-Adding changelog