JAGUAR: Joint Analysis of Genotype and Group-Specific Variability Using a Novel Score Test Approach to Map Expression Quantitative Trait Loci (eQTL)

Implements a novel score test that measures 1) the overall shift in the gene expression due to genotype (additive genetic effect), and 2) group-specific changes in gene expression due to genotype (interaction effect) in a mixed-effects model framework.

Version: 3.0.1
Depends: R (≥ 3.0.0), Rcpp, plyr, lme4, reshape2
LinkingTo: RcppArmadillo, Rcpp, RcppProgress
Published: 2016-07-27
Author: Chaitanya R. Acharya and Andrew S. Allen
Maintainer: Chaitanya Acharya <c.acharya at>
License: GPL-2
NeedsCompilation: yes
Materials: README
CRAN checks: JAGUAR results


Reference manual: JAGUAR.pdf
Package source: JAGUAR_3.0.1.tar.gz
Windows binaries: r-devel:, r-devel-gcc8:, r-release:, r-oldrel:
OS X binaries: r-release: JAGUAR_3.0.1.tgz, r-oldrel: JAGUAR_3.0.1.tgz
Old sources: JAGUAR archive


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