Last updated on 2023-03-20 09:49:30 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.15.2 | NOTE | ||||
| r-devel-linux-x86_64-debian-gcc | 0.15.2 | 8.28 | 36.22 | 44.50 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.15.2 | 92.51 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 0.15.2 | 91.89 | NOTE | |||
| r-patched-linux-x86_64 | 0.15.2 | 10.27 | 52.03 | 62.30 | OK | |
| r-release-linux-x86_64 | 0.15.2 | 9.82 | 53.23 | 63.05 | OK | |
| r-release-macos-arm64 | 0.15.2 | 36.00 | OK | |||
| r-release-macos-x86_64 | 0.15.2 | 44.00 | OK | |||
| r-release-windows-x86_64 | 0.15.2 | 26.00 | 110.00 | 136.00 | OK | |
| r-oldrel-macos-arm64 | 0.15.2 | 37.00 | OK | |||
| r-oldrel-macos-x86_64 | 0.15.2 | 63.00 | OK | |||
| r-oldrel-windows-ix86+x86_64 | 0.15.2 | 27.00 | 68.00 | 95.00 | OK |
Version: 0.15.2
Check: Rd files
Result: NOTE
checkRd: (-1) Intervals-class.Rd:109: Escaped LaTeX specials: \_
checkRd: (-1) Intervals-class.Rd:110: Escaped LaTeX specials: \_
checkRd: (-1) Intervals_virtual-class.Rd:68: Escaped LaTeX specials: \_
checkRd: (-1) Intervals_virtual-class.Rd:76: Escaped LaTeX specials: \_
checkRd: (-1) Intervals_virtual-class.Rd:77: Escaped LaTeX specials: \_
checkRd: (-1) Intervals_virtual-class.Rd:78: Escaped LaTeX specials: \_
checkRd: (-1) Intervals_virtual-class.Rd:79: Escaped LaTeX specials: \_
checkRd: (-1) Intervals_virtual-class.Rd:81: Escaped LaTeX specials: \_
checkRd: (-1) Intervals_virtual-class.Rd:88: Escaped LaTeX specials: \_
checkRd: (-1) Intervals_virtual-class.Rd:89: Escaped LaTeX specials: \_
checkRd: (-1) Intervals_virtual-class.Rd:90: Escaped LaTeX specials: \_
checkRd: (-1) sgd.Rd:12: Escaped LaTeX specials: \_
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.15.2
Check: examples
Result: ERROR
Running examples in ‘intervals-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: clusters
> ### Title: Identify clusters in a collection of positions or intervals
> ### Aliases: clusters clusters,numeric-method
> ### clusters,Intervals_virtual-method
>
> ### ** Examples
>
> # Numeric method
> w <- 20
> x <- sample( 1000, 100 )
> c1 <- clusters( x, w )
Error in .local(x, ...) : DLL requires the use of native symbols
Calls: clusters ... clusters -> .local -> reduce -> reduce -> .local -> .Call
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.15.2
Check: tests
Result: ERROR
Running ‘intervals_test_code.R’ [1s/2s]
Running the tests in ‘tests/intervals_test_code.R’ failed.
Complete output:
> library( "intervals" )
>
> ######## NAs and empty intervals
>
> u <- Intervals_full( as.numeric(NA), type = "Z" )
> u <- c( u, u )
> v <- Intervals_full( c(1,3,1,Inf), type = "Z" )
> x <- Intervals( 1, closed = FALSE, type = "Z" ) # empty
> w <- c( x, u, v )
Warning message:
Coercion to 'Intervals_full' required.
> rownames(w) <- letters[ 1:nrow(w) ]
>
> x
Object of class Intervals
1 interval over Z:
(1, 1)
> u
Object of class Intervals_full
2 intervals over Z:
[NA, NA]
[NA, NA]
> v
Object of class Intervals_full
2 intervals over Z:
[1, 1]
[3, Inf]
> w
Object of class Intervals_full
5 intervals over Z:
a (1, 1)
b [NA, NA]
c [NA, NA]
d [1, 1]
e [3, Inf]
>
> is.na(w)
a b c d e
FALSE TRUE TRUE FALSE FALSE
> empty(w)
[1] TRUE NA NA FALSE FALSE
>
> distance_to_nearest( u, v )
Error in .local(from, to, ...) : DLL requires the use of native symbols
Calls: distance_to_nearest ... .local -> which_nearest -> which_nearest -> .local -> .Call
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.15.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘intervals_overview.Rnw’ using Sweave
Error: processing vignette ‘intervals_overview.Rnw’ failed with diagnostics:
chunk 5 (label = plotting)
Error in plot.Intervals_full(x, ...) :
DLL requires the use of native symbols
--- failed re-building ‘intervals_overview.Rnw’
SUMMARY: processing the following file failed:
‘intervals_overview.Rnw’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc