CRAN Package Check Results for Package dexter

Last updated on 2019-12-14 09:51:31 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.2 95.25 171.27 266.52 OK
r-devel-linux-x86_64-debian-gcc 1.0.2 68.82 121.36 190.18 OK
r-devel-linux-x86_64-fedora-clang 1.0.2 337.94 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0.2 320.14 OK
r-devel-windows-ix86+x86_64 1.0.1 183.00 290.00 473.00 NOTE
r-devel-windows-ix86+x86_64-gcc8 1.0.1 188.00 308.00 496.00 NOTE
r-patched-linux-x86_64 1.0.2 79.35 138.96 218.31 OK
r-patched-solaris-x86 1.0.2 295.90 ERROR
r-release-linux-x86_64 1.0.2 79.05 141.33 220.38 OK
r-release-windows-ix86+x86_64 1.0.2 242.00 257.00 499.00 NOTE
r-release-osx-x86_64 1.0.2 WARN
r-oldrel-windows-ix86+x86_64 1.0.1 178.00 171.00 349.00 NOTE
r-oldrel-osx-x86_64 1.0.2 WARN

Check Details

Version: 1.0.2
Check: installed package size
Result: NOTE
     installed size is 8.6Mb
     sub-directories of 1Mb or more:
     doc 1.1Mb
     libs 6.8Mb
Flavors: r-devel-linux-x86_64-fedora-clang, r-release-windows-ix86+x86_64, r-release-osx-x86_64, r-oldrel-osx-x86_64

Version: 1.0.1
Check: installed package size
Result: NOTE
     installed size is 5.9Mb
     sub-directories of 1Mb or more:
     doc 1.1Mb
     libs 4.2Mb
Flavors: r-devel-windows-ix86+x86_64, r-devel-windows-ix86+x86_64-gcc8, r-oldrel-windows-ix86+x86_64

Version: 1.0.2
Check: tests
Result: ERROR
     Running ‘testthat.R’ [20s/22s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > Sys.setenv("R_TESTS" = "")
     > library(testthat)
     > library(dexter)
     >
     > test_check("dexter")
     | retrieving data...
    
     |==========| retrieving data...
    
     |==========| retrieving data...
    
     |=======Error in solve.default(H * scale, sufI - EsufI) :
     system is computationally singular: reciprocal condition number = 2.18096e-17
     =Error in solve.default(H * scale, sufI - EsufI) :
     Lapack routine dgesv: system is exactly singular: U[3,3] = 0
     ── 1. Error: inconsistencies between data and parms are handled correctly (@test
     problem cannot be computed
     Backtrace:
     1. dexter::fit_enorm(...)
     2. dexter:::fit_enorm_(...)
     3. dexter:::calibrate_CML(...)
    
     | retrieving data...
    
     |==========2000 responses imported.
     | retrieving data...
    
     ||| retrieving data...
    
     ||2000 responses imported.
    
     rules_changed: 1
     rules_added: 0
     | retrieving data...
    
     |==========| retrieving data...
    
     |==========| retrieving data...
    
     |==========
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     |=========================================================================| 100%| retrieving data...
    
     | [1] "S1DoCurse" "S1DoScold" "S1DoShout" "S1WantCurse" "S1WantScold"
     [6] "S1WantShout" "S2DoCurse" "S2DoScold" "S2DoShout" "S2WantCurse"
     [11] "S2WantScold" "S2WantShout" "S3DoCurse" "S3DoScold" "S3DoShout"
     [16] "S3WantCurse" "S3WantScold" "S3WantShout" "S4DoCurse" "S4DoScold"
     [21] "S4DoShout" "S4WantCurse" "S4WantScold" "S4WantShout"
     | retrieving data...
    
     |=======Error in solve.default(H * scale, sufI - EsufI) :
     Lapack routine dgesv: system is exactly singular: U[4,4] = 0
     In addition: Warning message:
     call dbDisconnect() when finished working with a connection
     Error in solve.default(H * scale, sufI - EsufI) :
     Lapack routine dgesv: system is exactly singular: U[4,4] = 0
     ── 2. Failure: calibration of verbal aggression dataset matches oplm results, wi
     `object` threw an error.
     Message: problem cannot be computed
     Class: simpleError/error/condition
     Backtrace:
     1. dexter:::expect_no_error(fit_enorm(db, item_score <= 1))
     7. dexter::fit_enorm(db, item_score <= 1)
     8. dexter:::fit_enorm_(...)
     9. dexter:::calibrate_CML(...)
    
     | retrieving data...
    
     |========Error in solve.default(H * scale, sufI - EsufI) :
     system is computationally singular: reciprocal condition number = 3.00518e-25
     Error in solve.default(H * scale, sufI - EsufI) :
     system is computationally singular: reciprocal condition number = 1.5927e-28
     ── 3. Error: populations work (@test_plausible_values.R#9) ────────────────────
     problem cannot be computed
     Backtrace:
     1. dexter::fit_enorm(...)
     2. dexter:::fit_enorm_(...)
     3. dexter:::calibrate_CML(...)
    
     | retrieving data...
    
     |==========| retrieving data...
    
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     |=========================================================================| 100%══ testthat results ═══════════════════════════════════════════════════════════
     [ OK: 153 | SKIPPED: 4 | WARNINGS: 0 | FAILED: 3 ]
     1. Error: inconsistencies between data and parms are handled correctly (@test_ability.R#14)
     2. Failure: calibration of verbal aggression dataset matches oplm results, with fixed and unfixed (@test_enorm.R#90)
     3. Error: populations work (@test_plausible_values.R#9)
    
     Error: testthat unit tests failed
     Execution halted
Flavor: r-patched-solaris-x86

Version: 1.0.2
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘DIF_vignette.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    no column `person_id` provided, automatically generating unique person id's
    --- finished re-building ‘DIF_vignette.Rmd’
    
    --- re-building ‘Equating.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    no column `person_id` provided, automatically generating unique person id's
    no column `person_id` provided, automatically generating unique person id's
    no column `person_id` provided, automatically generating unique person id's
    Quitting from lines 236-243 (Equating.Rmd)
    Error: processing vignette 'Equating.Rmd' failed with diagnostics:
    problem cannot be computed
    --- failed re-building ‘Equating.Rmd’
    
    --- re-building ‘Plausible_Values.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    --- finished re-building ‘Plausible_Values.Rmd’
    
    --- re-building ‘Test_Individual_differences.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    no column `person_id` provided, automatically generating unique person id's
    --- finished re-building ‘Test_Individual_differences.Rmd’
    
    --- re-building ‘dexter.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    --- finished re-building ‘dexter.Rmd’
    
    --- re-building ‘profile-plots.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    no column `person_id` provided, automatically generating unique person id's
    --- finished re-building ‘profile-plots.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘Equating.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-patched-solaris-x86

Version: 1.0.2
Check: re-building of vignette outputs
Result: WARN
    Error(s) in re-building vignettes:
    --- re-building ‘DIF_vignette.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    no column `person_id` provided, automatically generating unique person id's
    --- finished re-building ‘DIF_vignette.Rmd’
    
    --- re-building ‘Equating.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    no column `person_id` provided, automatically generating unique person id's
    no column `person_id` provided, automatically generating unique person id's
    no column `person_id` provided, automatically generating unique person id's
    --- finished re-building ‘Equating.Rmd’
    
    --- re-building ‘Plausible_Values.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Quitting from lines 94-101 (Plausible_Values.Rmd)
    Error: processing vignette 'Plausible_Values.Rmd' failed with diagnostics:
    replacement has 10 rows, data has 11
    --- failed re-building ‘Plausible_Values.Rmd’
    
    --- re-building ‘Test_Individual_differences.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    no column `person_id` provided, automatically generating unique person id's
    --- finished re-building ‘Test_Individual_differences.Rmd’
    
    --- re-building ‘dexter.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    --- finished re-building ‘dexter.Rmd’
    
    --- re-building ‘profile-plots.Rmd’ using rmarkdown
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    no column `person_id` provided, automatically generating unique person id's
    --- finished re-building ‘profile-plots.Rmd’
    
    SUMMARY: processing the following file failed:
     ‘Plausible_Values.Rmd’
    
    Error: Vignette re-building failed.
    Execution halted
Flavor: r-release-osx-x86_64

Version: 1.0.2
Check: re-building of vignette outputs
Result: WARN
    Error in re-building vignettes:
     ...
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    
    Attaching package: 'dplyr'
    
    The following objects are masked from 'package:stats':
    
     filter, lag
    
    The following objects are masked from 'package:base':
    
     intersect, setdiff, setequal, union
    
    no column `person_id` provided, automatically generating unique person id's
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    no column `person_id` provided, automatically generating unique person id's
    no column `person_id` provided, automatically generating unique person id's
    no column `person_id` provided, automatically generating unique person id's
    Warning in engine$weave(file, quiet = quiet, encoding = enc) :
     Pandoc (>= 1.12.3) and/or pandoc-citeproc not available. Falling back to R Markdown v1.
    Quitting from lines 94-101 (Plausible_Values.Rmd)
    Error: processing vignette 'Plausible_Values.Rmd' failed with diagnostics:
    replacement has 10 rows, data has 11
    Execution halted
Flavor: r-oldrel-osx-x86_64