* using log directory 'd:/Rcompile/CRANpkg/local/4.4/malariaAtlas.Rcheck' * using R version 4.4.3 (2025-02-28 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.3.0 GNU Fortran (GCC) 13.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'malariaAtlas/DESCRIPTION' ... OK * this is package 'malariaAtlas' version '1.6.4' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'malariaAtlas' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [2s] OK * checking whether the package can be loaded with stated dependencies ... [2s] OK * checking whether the package can be unloaded cleanly ... [2s] OK * checking whether the namespace can be loaded with stated dependencies ... [2s] OK * checking whether the namespace can be unloaded cleanly ... [2s] OK * checking loading without being on the library search path ... [2s] OK * checking whether startup messages can be suppressed ... [2s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [11s] OK * checking Rd files ... [1s] OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... [6s] OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [7s] OK Running 'testthat.R' [7s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [13m] ERROR Error(s) in re-building vignettes: --- re-building 'overview.Rmd' using rmarkdown Quitting from overview.Rmd:199-201 [unnamed-chunk-25] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: ! Cannot open "D:\temp\2025_11_12_01_50_01_6119\RtmpcFdGvs\filed72012155691.json"; The source could be corrupt or not supported. See `st_drivers()` for a list of supported formats. --- Backtrace: ▆ 1. ├─ggplot2::autoplot(MDG_pr_data) 2. └─malariaAtlas:::autoplot.pr.points(MDG_pr_data) 3. └─malariaAtlas::getShp(ISO = unique_iso, format = "df", admin_level = admin_level_request) 4. └─malariaAtlas::listShp(...) 5. └─future.apply::future_lapply(...) 6. └─future.apply:::future_xapply(...) 7. └─base::tryCatch(...) 8. └─base (local) tryCatchList(expr, classes, parentenv, handlers) 9. └─base (local) tryCatchOne(...) 10. └─value[[3L]](cond) 11. └─future.apply:::onError(e, futures = fs, debug = debug) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'overview.Rmd' failed with diagnostics: Cannot open "D:\temp\2025_11_12_01_50_01_6119\RtmpcFdGvs\filed72012155691.json"; The source could be corrupt or not supported. See `st_drivers()` for a list of supported formats. --- failed re-building 'overview.Rmd' SUMMARY: processing the following file failed: 'overview.Rmd' Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... [19s] OK * checking HTML version of manual ... [11s] OK * DONE Status: 1 ERROR