Package: FSAtools
Type: Package
Title: Fragment Analysis and Capillary Sequencing Tool Kit
Version: 2.0.5
Date: 2023-08-18
Authors@R: c(
   person("Sylvain", "Mareschal", role=c("aut", "cre"), email="mareschal@ovsa.fr"),
   person("Philippe", "Ruminy", role=c("dtc", "ctb")),
   person(c("Jean","R."), "Lobry", role="ctb"),
   person("Fabrice", "Jardin", role="ths")
   )
URL: https://bioinformatics.ovsa.fr/FSAtools
BugReports: https://github.com/maressyl/R.FSAtools/issues
Description: A flexible and interfaced framework for importing, processing and ploting Applied Biosystems data files. Application to Reverse-Transcriptase Multiplex Ligation-dependent Probe Amplification (RT-MLPA) gene-expression profiling and classification is illustrated in Mareschal, Ruminy et al (2015) <doi:10.1016/j.jmoldx.2015.01.007>. Gene-fusion detection and Sanger sequencing are illustrated in Mareschal, Palau et al (2021) <doi:10.1182/bloodadvances.2020002517>. Examples are provided for genotyping applications as well.
Note: FSAtools replaces and generalizes the former MLPA package from
        the same authors.
Depends: graphics, grDevices, stats, utils, R (>= 2.10)
Imports: methods
Suggests: Biostrings, parallel, tcltk, tools
License: GPL (>= 3)
NeedsCompilation: no
Packaged: 2023-08-18 14:00:53 UTC; sylvain
Author: Sylvain Mareschal [aut, cre],
  Philippe Ruminy [dtc, ctb],
  Jean R. Lobry [ctb],
  Fabrice Jardin [ths]
Maintainer: Sylvain Mareschal <mareschal@ovsa.fr>
Repository: CRAN
Date/Publication: 2023-08-18 18:12:35 UTC
Built: R 4.2.3; ; 2023-08-20 23:51:45 UTC; windows
