Package: hierGWAS
Title: Asessing statistical significance in predictive GWA studies
Version: 1.39.0
Author: Laura Buzdugan
Maintainer: Laura Buzdugan <buzdugan@stat.math.ethz.ch>
Description: Testing individual SNPs, as well as arbitrarily large groups of SNPs in GWA studies, using a joint model of all SNPs. The method controls the FWER, and provides an automatic, data-driven refinement of the SNP clusters to smaller groups or single markers.
Depends: R (>= 3.2.0)
License: GPL-3
LazyData: true
Imports: fastcluster,glmnet, fmsb
Suggests: BiocGenerics, RUnit, MASS
biocViews: SNP, LinkageDisequilibrium, Clustering
Collate: 'cluster.snp.R' 'lasso.select.R' 'multisplit.R' 'MEL.R'
        'test.snp.R' 'adj.pval.R' 'comp.cluster.pval.R'
        'iterative.DFS.R' 'test.hierarchy.R' 'return.r2.R'
        'compute.r2.R'
git_url: https://git.bioconductor.org/packages/hierGWAS
git_branch: devel
git_last_commit: 9de6d7e
git_last_commit_date: 2025-04-15
Repository: Bioconductor 3.22
Date/Publication: 2025-06-04
NeedsCompilation: no
Packaged: 2025-06-04 23:39:35 UTC; biocbuild
Built: R 4.5.0; ; 2025-06-05 13:10:32 UTC; windows
