add_1D_features	add_1D_features
add_2D_features	add_2D_features
add_hicpro_allvalidpairs_counts	add_hicpro_allvalidpairs_counts
add_hicpro_matrix_counts	add_hicpro_matrix_counts
add_hic_counts	add_hic_counts
construct_features	construct_features
construct_features_chr	construct_features_chr
construct_features_parallel	construct_features_parallel
expand_1D_features	expand_1D_features
extract_hic_eigenvectors	extract_hic_eigenvectors
generate_binned_gi_list	generate_binned_gi_list
generate_bintolen_gi_list	generate_bintolen_gi_list
generate_df_gi_list	generate_df_gi_list
get_chrs	get_chrs
get_chr_sizes	get_chr_sizes
get_enzyme_cutsites	get_enzyme_cutsites
gi_list2HTClist	gi_list2HTClist
gi_list_binsize_detect	gi_list_binsize_detect
gi_list_Dthreshold.detect	gi_list_Dthreshold.detect
gi_list_read	gi_list_read
gi_list_topdom	gi_list_topdom
gi_list_validate	gi_list_validate
gi_list_write	gi_list_write
hic2icenorm_gi_list	hic2icenorm_gi_list
hicdc2hic	hicdc2hic
hicdcdiff	hicdcdiff
HiCDCPlus	HiCDCPlus
HiCDCPlus_chr	HiCDCPlus_chr
HiCDCPlus_parallel	HiCDCPlus_parallel
HTClist2gi_list	HTClist2gi_list
straw	straw
straw_dump	straw_dump
