Package: AnVIL
Title: Bioconductor on the AnVIL compute environment
Version: 1.20.1
Authors@R: c(
    person(
        "Marcel", "Ramos", role = c("aut", "cre"),
        email = "marcel.ramos@sph.cuny.edu",
        comment = c(ORCID = "0000-0002-3242-0582")
    ),
    person(
       "Martin", "Morgan", role = c("aut"),
       comment = c(ORCID = "0000-0002-5874-8148")
    ),
    person("Kayla", "Interdonato", role = "aut"),
    person("Yubo", "Cheng", role = "aut"),
    person("Nitesh", "Turaga", role = "aut"),
    person("BJ", "Stubbs", role =  "ctb"),
    person("Vincent", "Carey", role = "ctb"),
    person("Sehyun", "Oh", role = "ctb"),
    person("Sweta", "Gopaulakrishnan", role = "ctb"),
    person("Valerie", "Obenchain", role = "ctb"))
Description: The AnVIL is a cloud computing resource developed in part
    by the National Human Genome Research Institute. The AnVIL package
    provides end-user and developer functionality. For the end-user,
    AnVIL provides fast binary package installation, utitlities for
    working with Terra / AnVIL table and data resources, and
    convenient functions for file movement to and from Google cloud
    storage. For developers, AnVIL provides programatic access to the
    Terra, Leonardo, Rawls, and Dockstore RESTful programming
    interface, including helper functions to transform JSON responses
    to formats more amenable to manipulation in R.
License: Artistic-2.0
Encoding: UTF-8
Depends: R (>= 4.1.0), dplyr, AnVILBase
Imports: stats, utils, methods, futile.logger, jsonlite, httr,
        rapiclient (>= 0.1.3), yaml, tibble, tidyselect, tidyr, rlang,
        shiny, DT, miniUI, htmltools, BiocBaseUtils
Suggests: parallel, knitr, rmarkdown, testthat, withr, readr,
        BiocStyle, devtools, AnVILAz, AnVILGCP, lifecycle
Collate: utilities.R authenticate.R api.R AnVIL-package.R Service.R
        Services.R Leonardo.R Terra.R Rawls.R Dockstore.R TDR.R
        gcloud_sdk.R gcloud.R gsutil.R localize.R drs.R av.R
        avworkflow.R avworkflow_configuration.R gadgets.R zzz.R
VignetteBuilder: knitr
biocViews: Infrastructure
RoxygenNote: 7.3.2
Roxygen: list(markdown = TRUE)
Date: 2025-04-07
git_url: https://git.bioconductor.org/packages/AnVIL
git_branch: RELEASE_3_21
git_last_commit: 4f6556a
git_last_commit_date: 2025-05-21
Repository: Bioconductor 3.21
Date/Publication: 2025-05-22
NeedsCompilation: no
Packaged: 2025-05-22 21:36:12 UTC; biocbuild
Author: Marcel Ramos [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-3242-0582>),
  Martin Morgan [aut] (ORCID: <https://orcid.org/0000-0002-5874-8148>),
  Kayla Interdonato [aut],
  Yubo Cheng [aut],
  Nitesh Turaga [aut],
  BJ Stubbs [ctb],
  Vincent Carey [ctb],
  Sehyun Oh [ctb],
  Sweta Gopaulakrishnan [ctb],
  Valerie Obenchain [ctb]
Maintainer: Marcel Ramos <marcel.ramos@sph.cuny.edu>
Built: R 4.5.0; ; 2025-05-23 13:13:02 UTC; windows
