derfinderData
This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see derfinderData.
Processed BigWigs from BrainSpan for examples
Bioconductor version: 3.8
Processed 22 samples from BrainSpan keeping only the information for chromosome 21. Data is stored in the BigWig format and is used for examples in other packages.
Author: Leonardo Collado-Torres [aut, cre], Andrew Jaffe [aut], Jeffrey Leek [aut, ths]
Maintainer: Leonardo Collado-Torres <lcollado at jhu.edu>
citation("derfinderData")):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("derfinderData")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("derfinderData")| Introduction to derfinderData | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | ExperimentData, Homo_sapiens_Data, RNASeqData |
| Version | 2.0.0 |
| License | Artistic-2.0 |
| Depends | R (>= 3.1.1) |
| Imports | |
| System Requirements | |
| URL | https://github.com/leekgroup/derfinderData |
| Bug Reports | https://github.com/leekgroup/derfinderData/issues |
See More
| Suggests | sessioninfo, knitcitations (>= 1.0.1), knitr (>= 1.6), knitrBootstrap (>= 0.9.0), RefManageR, rmarkdown (>= 0.3.3) |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | derfinder, derfinderPlot |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | derfinderData_2.0.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.11 (El Capitan) | |
| Source Repository | git clone https://git.bioconductor.org/packages/derfinderData |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/derfinderData |
| Package Short Url | https://bioconductor.org/packages/derfinderData/ |
| Package Downloads Report | Download Stats |