To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("MODA")
In most cases, you don't need to download the package archive at all.
MODA
|
This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see MODA.
MODA: MOdule Differential Analysis for weighted gene co-expression network
Bioconductor version: 3.4
MODA can be used to estimate and construct condition-specific gene co-expression networks, and identify differentially expressed subnetworks as conserved or condition specific modules which are potentially associated with relevant biological processes.
Author: Dong Li, James B. Brown, Luisa Orsini, Zhisong Pan, Guyu Hu and Shan He
Maintainer: Dong Li <dxl466 at cs.bham.ac.uk>
Citation (from within R,
enter citation("MODA")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("MODA")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("MODA")
| R Script | Usage of MODA | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | DifferentialExpression, GeneExpression, Microarray, Network, Software |
| Version | 1.0.0 |
| In Bioconductor since | BioC 3.4 (R-3.3) (0.5 years) |
| License | GPL (>= 2) |
| Depends | R (>= 3.1.0) |
| Imports | WGCNA, dynamicTreeCut, igraph |
| LinkingTo | |
| Suggests | BiocStyle, knitr |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | MODA_1.0.0.tar.gz |
| Windows Binary | MODA_1.0.0.zip |
| Mac OS X 10.9 (Mavericks) | MODA_1.0.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/MODA/tree/release-3.4 |
| Package Short Url | http://bioconductor.org/packages/MODA/ |
| Package Downloads Report | Download Stats |
Documentation »
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