To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("CytoML")
In most cases, you don't need to download the package archive at all.
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This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see CytoML.
Bioconductor version: 3.4
This package is designed to use GatingML2.0 as the standard format to exchange the gated data with other software platform.
Author: Mike Jiang
Maintainer: Mike Jiang <wjiang2 at fhcrc.org>
Citation (from within R,
enter citation("CytoML")):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("CytoML")
| HTML | R Script | How to export a GatingSet to GatingML |
| HTML | R Script | How to parse gatingML into a GatingSet |
| Reference Manual | ||
| Text | NEWS |
| biocViews | DataImport, DataRepresentation, FlowCytometry, Software |
| Version | 1.0.1 |
| In Bioconductor since | BioC 3.4 (R-3.3) (0.5 years) |
| License | Artistic-2.0 |
| Depends | |
| Imports | flowCore, flowWorkspace(>= 3.19.24), openCyto(>= 1.11.3), XML, data.table, flowUtils(>= 1.35.7), jsonlite, RBGL, ncdfFlow, Rgraphviz, Biobase, methods, graph, graphics, utils, base64enc |
| LinkingTo | |
| Suggests | testthat, flowWorkspaceData, knitr, ggcyto |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Follow Installation instructions to use this package in your R session.
| Package Source | CytoML_1.0.1.tar.gz |
| Windows Binary | CytoML_1.0.1.zip |
| Mac OS X 10.9 (Mavericks) | CytoML_1.0.1.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/CytoML/tree/release-3.4 |
| Package Short Url | http://bioconductor.org/packages/CytoML/ |
| Package Downloads Report | Download Stats |
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