To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("destiny")

In most cases, you don't need to download the package archive at all.

destiny

This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see destiny.

Creates diffusion maps

Bioconductor version: 3.3

Create and plot diffusion maps.

Author: Philipp Angerer [cre, aut], Laleh Haghverdi [ctb], Maren Büttner [ctb], Fabian Theis [ctb], Carsten Marr [ctb], Florian Büttner [ctb]

Maintainer: Philipp Angerer <philipp.angerer at helmholtz-muenchen.de>

Citation (from within R, enter citation("destiny")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("destiny")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("destiny")

biocViews	CellBasedAssays, CellBiology, Clustering, Software, Visualization
Version	1.2.1
In Bioconductor since	BioC 3.2 (R-3.2) (1 year)
License	GPL
Depends	R (>= 3.2.0), methods, Biobase
Imports	graphics, Rcpp (>= 0.10.3), RcppEigen, BiocGenerics, Matrix, Hmisc, FNN, VIM, proxy, igraph, scatterplot3d
LinkingTo	Rcpp, RcppEigen
Suggests	RColorBrewer, ggplot2, nbconvertR
SystemRequirements	C++11
Enhances	rgl
URL
Depends On Me
Imports Me	cytofkit
Suggests Me	scater
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	destiny_1.2.1.tar.gz
Windows Binary	destiny_1.2.1.zip (32- & 64-bit)
Mac OS X 10.9 (Mavericks)	destiny_1.2.1.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/destiny/tree/release-3.3
Package Short Url	http://bioconductor.org/packages/destiny/
Package Downloads Report	Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Please read the posting guide. Post questions about Bioconductor to one of the following locations: