IsoCorrectoRGUI

This is the released version of IsoCorrectoRGUI; for the devel version, see IsoCorrectoRGUI.

Graphical User Interface for IsoCorrectoR

Bioconductor version: Release (3.21)

IsoCorrectoRGUI is a Graphical User Interface for the IsoCorrectoR package. IsoCorrectoR performs the correction of mass spectrometry data from stable isotope labeling/tracing metabolomics experiments with regard to natural isotope abundance and tracer impurity. Data from both MS and MS/MS measurements can be corrected (with any tracer isotope: 13C, 15N, 18O...), as well as high resolution MS data from multiple-tracer experiments (e.g. 13C and 15N used simultaneously).

Author: Christian Kohler [cre, aut], Paul Kuerner [aut], Paul Heinrich [aut]

Maintainer: Christian Kohler <christian.kohler at ur.de>

Citation (from within R, enter citation("IsoCorrectoRGUI")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("IsoCorrectoRGUI")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("IsoCorrectoRGUI")

IsoCorrectoR	HTML	R Script
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	GUI, ImmunoOncology, MassSpectrometry, Metabolomics, Preprocessing, Software
Version	1.24.0
In Bioconductor since	BioC 3.9 (R-3.6) (6.5 years)
License	GPL-3
Depends	R (>= 3.6)
Imports	IsoCorrectoR, readxl, tcltk2, tcltk, utils
System Requirements
URL	https://genomics.ur.de/files/IsoCorrectoRGUI

Suggests	knitr, rmarkdown, testthat, BiocStyle
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me	IsoCorrectoR
Links To Me
Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	IsoCorrectoRGUI_1.24.0.tar.gz
Windows Binary (x86_64)	IsoCorrectoRGUI_1.24.0.zip
macOS Binary (x86_64)	IsoCorrectoRGUI_1.24.0.tgz
macOS Binary (arm64)	IsoCorrectoRGUI_1.24.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/IsoCorrectoRGUI
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/IsoCorrectoRGUI
Bioc Package Browser	https://code.bioconductor.org/browse/IsoCorrectoRGUI/
Package Short Url	https://bioconductor.org/packages/IsoCorrectoRGUI/
Package Downloads Report	Download Stats