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GeneRfold
R for genes and sequences, using viennaRNA package (fold)
Bioconductor version: 2.7
Package manipulating sequences with fold routines
Author: Y. d'Aubenton-Carafa, A. Lucas & C. Thermes
Maintainer: Antoine Lucas <lucas at cgm.cnrs-gif.fr>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("GeneRfold")
To cite this package in a publication, start R and enter:
citation("GeneRfold")
Documentation
| R Script | Introduction to GeneR | |
| rnafold.pdf | ||
| Reference Manual |
Details
| biocViews | Annotation, Genetics |
| Depends | R (>= 2.6.0), GeneR |
| Imports | |
| Suggests | |
| System Requirements | |
| License | CeCILL-2.0 |
| URL | http://www.tbi.univie.ac.at/~ivo/RNA/ |
| Depends On Me | GeneGA |
| Imports Me | |
| Suggests Me | |
| Version | 1.8.0 |
| Since | Bioconductor 2.2 (R-2.7) |
Package Downloads
| Package Source | GeneRfold_1.8.0.tar.gz |
| Windows Binary | |
| MacOS 10.5 (Leopard) binary | GeneRfold_1.8.0.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Annotation
- Variants
- Flow Cytometry and other assays
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