Bioconductor version: 2.5
Rtreemix is a package that offers an environment for estimating the mutagenetic trees mixture models from cross-sectional data and using them for various predictions. It includes functions for fitting the trees mixture models, likelihood computations, model comparisons, waiting time estimations, stability analysis, etc.
Author: Jasmina Bogojeska
Maintainer: Jasmina Bogojeska <jasmina at mpi-inf.mpg.de>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("Rtreemix")
To cite this package in a publication, start R and enter:
citation("Rtreemix")
| ClassDiagram.pdf | ||
| ExtendedVignette.pdf | ||
| R Script | Rtreemix | |
| topologies.pdf | ||
| Reference Manual |
| biocViews | Bioinformatics |
| Depends | R (>= 2.5.0), methods, graph, Biobase |
| Imports | methods, graph, Biobase, Hmisc |
| Suggests | Rgraphviz |
| System Requirements | |
| License | LGPL |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Version | 1.8.0 |
| Since | Bioconductor 2.2 (R-2.7) |
| Package Source | Rtreemix_1.8.0.tar.gz |
| Windows Binary | Rtreemix_1.8.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | Rtreemix_1.8.0.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!