copa

Functions to perform cancer outlier profile analysis.

COPA is a method to find genes that undergo recurrent fusion in a given cancer type by finding pairs of genes that have mutually exclusive outlier profiles.

Author	James W. MacDonald
Maintainer	James W. MacDonald

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("copa")

Documentation

copa Overview	PDF	R Script
Reference Manual

Details

biocViews	OneChannel , TwoChannel , DifferentialExpression , Visualization
Depends	Biobase , methods
Imports
Suggests	colonCA
System Requirements
License	Artistic
URL
Depends On Me
Imports Me
Suggests Me
Development History	Bioconductor Changelog

Package Downloads

Package source	copa_1.12.0.tar.gz
Windows binary	copa_1.12.0.zip
MacOS X 10.4 (Tiger) binary	copa_1.12.0.tgz
MacOS X 10.5 (Leopard) binary	copa_1.12.0.tgz
Package Downloads Report	Downloads Stats