The R Genetics Project is a collaborative effort to develop a complete set of tools for storing, accessing, manipulating, and analyzing genetics data, from small candidate-gene studies consisting of a few genetic markers to large whole-genome studies containing hundreds of thousands of markers. This package (GeneticsBase) provides a foundation of efficient data structures and easy-to-use manipulation functions.
| Author | Gregory Warnes Ross Lazarus Scott D Chasalow Giovanni Montana Michael O'Connell Junsheng Cheng Nitin Jain |
| Maintainer | The R Genetics Project |
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("GeneticsBase")
| CAMP_alleleSummary_html.pdf | ||
|---|---|---|
| CAMP_genotypeSummary_html.pdf | ||
| CAMP_LD_html.pdf | ||
| HOWTO: Load Genotype Data | R Script | |
| Summary Tables | R Script | |
| Summary Tables | R Script | |
| Reference Manual |
| biocViews | |
|---|---|
| Depends |
R
,
methods
,
combinat
,
xtable
,
mvtnorm
,
haplo.stats
|
| Imports |
gdata
,
gplots
,
gtools
,
MASS
|
| Suggests | |
| System Requirements | |
| License | LGPL |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Development History | Bioconductor Changelog |
| Package source | GeneticsBase_1.10.0.tar.gz |
|---|---|
| Windows binary | GeneticsBase_1.10.0.zip |
| MacOS X 10.4 (Tiger) binary | GeneticsBase_1.10.0.tgz |
| MacOS X 10.5 (Leopard) binary | GeneticsBase_1.10.0.tgz |
| Package Downloads Report | Downloads Stats |