############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/ENCODExplorer_2.20.0.tar.gz && rm -rf ENCODExplorer.buildbin-libdir && mkdir ENCODExplorer.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ENCODExplorer.buildbin-libdir ENCODExplorer_2.20.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL ENCODExplorer_2.20.0.zip && rm ENCODExplorer_2.20.0.tar.gz ENCODExplorer_2.20.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 40 763k 40 308k 0 0 687k 0 0:00:01 --:--:-- 0:00:01 686k 100 763k 100 763k 0 0 933k 0 --:--:-- --:--:-- --:--:-- 932k install for i386 * installing *source* package 'ENCODExplorer' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'ENCODExplorer' finding HTML links ... done ENCODEBindingConsensus-class html finding level-2 HTML links ... done ENCODEExpressionSummary-class html ENCODESummary-class html ENCODExplorer html GenomicOverlaps-class html GenomicOverlaps html buildConsensusPeaks html buildExpressionSummary html choose_interactive_value html combined_regions-GenomicOverlaps-method html combined_regions-set-GenomicOverlaps-GRanges-method html consensus_indices html consensus_regions html createDesign html downloadEncode html download_dt_file html download_single_file html fuzzySearch html get_encode_df html get_encode_df_demo html get_encode_df_full html initial_regions-GenomicOverlaps-method html intersect_indices html intersect_matrix html intersect_regions html length-GenomicOverlaps-method html names-GenomicOverlaps-method html names-set-GenomicOverlaps-character-method html pairwise_overlap html queryConsensusPeaks html queryEncode html queryEncodeGeneric html queryExpressionGeneric html queryGeneExpression html queryTranscriptExpression html searchEncode html searchToquery html shinyEncode html split_by_metadata html union_indices html union_regions html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning: Package 'ENCODExplorer' is deprecated and will be removed from Bioconductor version 3.15 ** testing if installed package can be loaded from final location Warning: Package 'ENCODExplorer' is deprecated and will be removed from Bioconductor version 3.15 ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'ENCODExplorer' ... ** testing if installed package can be loaded Warning: Package 'ENCODExplorer' is deprecated and will be removed from Bioconductor version 3.15 * MD5 sums packaged installation of 'ENCODExplorer' as ENCODExplorer_2.20.0.zip * DONE (ENCODExplorer) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'ENCODExplorer' successfully unpacked and MD5 sums checked