sights
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see sights.
Statistics and dIagnostic Graphs for HTS
Bioconductor version: 3.9
SIGHTS is a suite of normalization methods, statistical tests, and diagnostic graphical tools for high throughput screening (HTS) assays. HTS assays use microtitre plates to screen large libraries of compounds for their biological, chemical, or biochemical activity.
Author: Elika Garg [aut, cre], Carl Murie [aut], Heydar Ensha [ctb], Robert Nadon [aut]
Maintainer: Elika Garg <elika.garg at mail.mcgill.ca>
citation("sights")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("sights")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("sights")| Using **SIGHTS** R-package | HTML | R Script |
| Reference Manual | ||
| NEWS | Text | |
| LICENSE | Text |
Details
| biocViews | BatchEffect, CellBasedAssays, ImmunoOncology, MicrotitrePlateAssay, MultipleComparison, Normalization, Preprocessing, QualityControl, Software, Visualization |
| Version | 1.10.0 |
| In Bioconductor since | BioC 3.4 (R-3.3) (7.5 years) |
| License | GPL-3 | file LICENSE |
| Depends | R (>= 3.3) |
| Imports | MASS (>= 7.3), qvalue(>= 2.2), ggplot2 (>= 2.0), reshape2 (>= 1.4), lattice (>= 0.2), stats (>= 3.3) |
| System Requirements | |
| URL | https://eg-r.github.io/sights/ |
| Bug Reports | https://github.com/eg-r/sights/issues |
See More
| Suggests | testthat, knitr, rmarkdown, ggthemes, gridExtra, xlsx |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | sights_1.10.0.tar.gz |
| Windows Binary | sights_1.10.0.zip |
| Mac OS X 10.11 (El Capitan) | sights_1.10.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/sights |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/sights |
| Bioc Package Browser | https://code.bioconductor.org/browse/sights/ |
| Package Short Url | https://bioconductor.org/packages/sights/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |