SLGI

This package is for version 3.9 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see SLGI.

Synthetic Lethal Genetic Interaction

Bioconductor version: 3.9

A variety of data files and functions for the analysis of genetic interactions

Author: Nolwenn LeMeur, Zhen Jiang, Ting-Yuan Liu, Jess Mar and Robert Gentleman

Maintainer: Nolwenn Le Meur <nlemeur at gmail.com>

Citation (from within R, enter citation("SLGI")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("SLGI")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SLGI")

SLGI Vignette	PDF	R Script
Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	Genetics, GraphAndNetwork, Network, Proteomics, Software
Version	1.44.0
In Bioconductor since	BioC 2.2 (R-2.7) (16 years)
License	Artistic-2.0
Depends	R (>= 2.10), ScISI, lattice
Imports	AnnotationDbi, Biobase, GO.db, ScISI, graphics, lattice, methods, stats, BiocGenerics
System Requirements
URL

Suggests	GO.db, org.Sc.sgd.db
Linking To
Enhances
Depends On Me	PCpheno
Imports Me
Suggests Me
Links To Me
Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	SLGI_1.44.0.tar.gz
Windows Binary	SLGI_1.44.0.zip
Mac OS X 10.11 (El Capitan)	SLGI_1.44.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/SLGI
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/SLGI
Bioc Package Browser	https://code.bioconductor.org/browse/SLGI/
Package Short Url	https://bioconductor.org/packages/SLGI/
Package Downloads Report	Download Stats
Old Source Packages for BioC 3.9	Source Archive