RTopper
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see RTopper.
This package is designed to perform Gene Set Analysis across multiple genomic platforms
Bioconductor version: 3.9
the RTopper package is designed to perform and integrate gene set enrichment results across multiple genomic platforms.
Author: Luigi Marchionni <marchion at jhu.edu>, Svitlana Tyekucheva <svitlana at jimmy.harvard.edu>
Maintainer: Luigi Marchionni <marchion at jhu.edu>
citation("RTopper")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("RTopper")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("RTopper")| RTopper user's manual | R Script | |
| Reference Manual | ||
| LICENSE | Text |
Details
| biocViews | Microarray, Software |
| Version | 1.30.0 |
| In Bioconductor since | BioC 2.9 (R-2.14) (12.5 years) |
| License | GPL (>= 3) |
| Depends | R (>= 2.11.0), Biobase |
| Imports | limma, multtest |
| System Requirements | |
| URL |
See More
| Suggests | limma, org.Hs.eg.db, KEGG.db, GO.db |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | RTopper_1.30.0.tar.gz |
| Windows Binary | RTopper_1.30.0.zip |
| Mac OS X 10.11 (El Capitan) | RTopper_1.30.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/RTopper |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/RTopper |
| Bioc Package Browser | https://code.bioconductor.org/browse/RTopper/ |
| Package Short Url | https://bioconductor.org/packages/RTopper/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |