LiquidAssociation
This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see LiquidAssociation.
LiquidAssociation
Bioconductor version: 3.9
The package contains functions for calculate direct and model-based estimators for liquid association. It also provides functions for testing the existence of liquid association given a gene triplet data.
Author: Yen-Yi Ho <yho at jhsph.edu>
Maintainer: Yen-Yi Ho <yho at jhsph.edu>
citation("LiquidAssociation")):
Installation
To install this package, start R (version "3.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("LiquidAssociation")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("LiquidAssociation")| LiquidAssociation Vignette | R Script | |
| Reference Manual |
Details
| biocViews | CellBiology, GeneExpression, Genetics, Network, Pathways, Software, TimeCourse |
| Version | 1.38.0 |
| In Bioconductor since | BioC 2.5 (R-2.10) (14.5 years) |
| License | GPL (>=3) |
| Depends | geepack, methods, yeastCC, org.Sc.sgd.db |
| Imports | Biobase, graphics, grDevices, methods, stats |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | fastLiquidAssociation |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | LiquidAssociation_1.38.0.tar.gz |
| Windows Binary | LiquidAssociation_1.38.0.zip |
| Mac OS X 10.11 (El Capitan) | LiquidAssociation_1.38.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/LiquidAssociation |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/LiquidAssociation |
| Bioc Package Browser | https://code.bioconductor.org/browse/LiquidAssociation/ |
| Package Short Url | https://bioconductor.org/packages/LiquidAssociation/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.9 | Source Archive |