- Home
- Bioconductor 3.3
- Annotation Packages
- MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5")
In most cases, you don't need to download the package archive at all.
MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5
|
This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5.
Minor allele frequency data from ExAC subset of non-TCGA exomes for hs37d5
Bioconductor version: 3.3
Store minor allele frequency data from the Exome Aggregation Consortium subset of non-TCGA exomes for single nucleotide variants in the human genome version hs37d5.
Author: Robert Castelo
Maintainer: Robert Castelo <robert.castelo at upf.edu>
Citation (from within R,
enter citation("MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5")
Documentation
| Reference Manual |
Details
| biocViews | AnnotationData, Genetics, Homo_sapiens, MafDb |
| Version | 3.3.0 |
| License | Artistic-2.0 |
| Depends | R (>= 3.0.0), VariantFiltering(>= 1.7.37) |
| Imports | utils, IRanges, GenomicRanges, BSgenome |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5_3.3.0.tar.gz |
| Windows Binary | |
| Mac OS X 10.9 (Mavericks) | |
| Package Short Url | http://bioconductor.org/packages/MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
