To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("BayesPeak")
In most cases, you don't need to download the package archive at all.
This package is for version 3.3 of Bioconductor; for the stable, up-to-date release version, see BayesPeak.
Bioconductor version: 3.3
This package is an implementation of the BayesPeak algorithm for peak-calling in ChIP-seq data.
Author: Christiana Spyrou, Jonathan Cairns, Rory Stark, Andy Lynch, Simon Tavar\\'{e},
Maintainer: Jonathan Cairns <jonathan.cairns at babraham.ac.uk>
Citation (from within R,
enter citation("BayesPeak")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("BayesPeak")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("BayesPeak")
R Script | BayesPeak Vignette | |
Reference Manual |
biocViews | ChIPSeq, Software |
Version | 1.24.0 |
In Bioconductor since | BioC 2.6 (R-2.11) (6.5 years) |
License | GPL (>= 2) |
Depends | R (>= 2.14), IRanges |
Imports | IRanges, graphics |
LinkingTo | |
Suggests | BiocStyle, parallel |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Package Source | BayesPeak_1.24.0.tar.gz |
Windows Binary | BayesPeak_1.24.0.zip (32- & 64-bit) |
Mac OS X 10.9 (Mavericks) | BayesPeak_1.24.0.tgz |
Subversion source | (username/password: readonly) |
Git source | https://github.com/Bioconductor-mirror/BayesPeak/tree/release-3.3 |
Package Short Url | http://bioconductor.org/packages/BayesPeak/ |
Package Downloads Report | Download Stats |
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