RGalaxy

This package is for version 3.12 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see RGalaxy.

Make an R function available in the Galaxy web platform


Bioconductor version: 3.12

Given an R function and its manual page, make the documented function available in Galaxy.

Author: Dan Tenenbaum

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("RGalaxy")):

Installation

To install this package, start R (version "4.0") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("RGalaxy")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RGalaxy")
Introduction to RGalaxy HTML R Script
Reference Manual PDF

Details

biocViews Infrastructure, Software
Version 1.34.0
In Bioconductor since BioC 2.11 (R-2.15) (11.5 years)
License Artistic-2.0
Depends XML, methods, tools, optparse
Imports BiocGenerics, Biobase, roxygen2
System Requirements
URL
See More
Suggests RUnit, hgu95av2.db, AnnotationDbi, knitr, formatR, Rserve
Linking To
Enhances RSclient
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package RGalaxy_1.34.0.tar.gz
Windows Binary RGalaxy_1.34.0.zip
macOS 10.13 (High Sierra) RGalaxy_1.34.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/RGalaxy
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/RGalaxy
Bioc Package Browser https://code.bioconductor.org/browse/RGalaxy/
Package Short Url https://bioconductor.org/packages/RGalaxy/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.12 Source Archive