RNAinteractMAPK

This package is for version 3.10 of Bioconductor; for the stable, up-to-date release version, see RNAinteractMAPK.

Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi


Bioconductor version: 3.10

This package includes all data used in the paper -Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi- by Horn, Sandmann, Fischer et al.., Nat. Methods, 2011. The package vignette shows the R code to reproduce all figures in the paper.

Author: Bernd Fischer <b.fischer at dkfz.de>

Maintainer: Bernd Fischer <b.fischer at dkfz.de>

Citation (from within R, enter citation("RNAinteractMAPK")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("RNAinteractMAPK")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RNAinteractMAPK")
RNAinteractMAPK PDF R Script
Reference Manual PDF

Details

biocViews CellCulture, Drosophila_melanogaster_Data, ExperimentData, MicrotitrePlateAssayData
Version 1.24.0
License Artistic-2.0
Depends R (>= 2.12.0), methods, fields, sparseLDA, RNAinteract
Imports grid, gdata, MASS, genefilter
System Requirements
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Suggests qvalue, lattice
Linking To
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Depends On Me
Imports Me
Suggests Me DmelSGI
Links To Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package RNAinteractMAPK_1.24.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository git clone https://git.bioconductor.org/packages/RNAinteractMAPK
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/RNAinteractMAPK
Package Short Url https://bioconductor.org/packages/RNAinteractMAPK/
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