silva128.1MgDb

This package is for version 3.10 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see silva128.1MgDb.

SILVA SSR rRNA release 128.1 Annotation Data


Bioconductor version: 3.10

Metagenome annotation package with for the SILVA SSR rRNA database release 128.1, Bacterial and Archeal sequences. Contains a MgDb-class object, defined in the metagenomeFeatures package.

Author: Nathan D. Olson <nolson at umias.umd.edu>, Joseph Nathaniel Paulson, Hector Corrada-Bravo

Maintainer: Nathan D. Olson <nolson at umiacs.umd.edu>

Citation (from within R, enter citation("silva128.1MgDb")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("silva128.1MgDb")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF
README Text

Details

biocViews AnnotationData, Metagenomics, Microbiome, Sequencing
Version 1.00.0
License Artistic-2.0
Depends R (>= 3.5)
Imports metagenomeFeatures(>= 1.99.9)
System Requirements
URL https://github.com/HCBravoLab/silva128.1MgDb
Bug Reports https://github.com/HCBravoLab/silva128.1MgDb/issues
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package silva128.1MgDb_1.00.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Package Short Url https://bioconductor.org/packages/silva128.1MgDb/
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