made4

This package is for version 3.10 of Bioconductor; for the stable, up-to-date release version, see made4.

Multivariate analysis of microarray data using ADE4


Bioconductor version: 3.10

Multivariate data analysis and graphical display of microarray data. Functions include between group analysis and coinertia analysis. It contains functions that require ADE4.

Author: Aedin Culhane

Maintainer: Aedin Culhane <Aedin at jimmy.harvard.edu>

Citation (from within R, enter citation("made4")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("made4")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("made4")
introduction.pdf PDF R Script
Reference Manual PDF

Details

biocViews Classification, Clustering, MultipleComparison, Software
Version 1.60.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 19 years)
License Artistic-2.0
Depends ade4, RColorBrewer, gplots, scatterplot3d
Imports
System Requirements
URL http://www.hsph.harvard.edu/aedin-culhane/
See More
Suggests affy
Linking To
Enhances
Depends On Me bgafun
Imports Me deco, omicade4
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package made4_1.60.0.tar.gz
Windows Binary made4_1.60.0.zip
Mac OS X 10.11 (El Capitan) made4_1.60.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/made4
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/made4
Bioc Package Browser https://code.bioconductor.org/browse/made4/
Package Short Url https://bioconductor.org/packages/made4/
Package Downloads Report Download Stats
Old Source Packages for BioC 3.10 Source Archive