To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("diggit")

In most cases, you don't need to download the package archive at all.

diggit

This package is for version 3.1 of Bioconductor; for the stable, up-to-date release version, see diggit.

Inference of Genetic Variants Driving Cellular Phenotypes

Bioconductor version: 3.1

Inference of Genetic Variants Driving Cellullar Phenotypes by the DIGGIT algorithm

Author: Mariano J Alvarez <reef103 at gmail.com>

Maintainer: Mariano J Alvarez <reef103 at gmail.com>

Citation (from within R, enter citation("diggit")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("diggit")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("diggit")

biocViews	FunctionalPrediction, GeneExpression, GeneRegulation, NetworkEnrichment, Software, SystemsBiology
Version	1.0.0
In Bioconductor since	BioC 3.1 (R-3.2) (1 year)
License	GPL (>=2)
Depends	R (>= 3.0.2), Biobase, methods
Imports	ks, viper(>= 1.3.1), parallel
LinkingTo
Suggests	diggitdata
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	diggit_1.0.0.tar.gz
Windows Binary	diggit_1.0.0.zip
Mac OS X 10.6 (Snow Leopard)	diggit_1.0.0.tgz
Mac OS X 10.9 (Mavericks)	diggit_1.0.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/diggit/tree/release-3.1
Package Short Url	http://bioconductor.org/packages/diggit/
Package Downloads Report	Download Stats

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