To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("SVM2CRM")

In most cases, you don't need to download the package archive at all.

SVM2CRM

This package is for version 3.1 of Bioconductor; for the stable, up-to-date release version, see SVM2CRM.

SVM2CRM: support vector machine for cis-regulatory elements detections

Bioconductor version: 3.1

Detection of cis-regulatory elements using svm implemented in LiblineaR.

Author: Guidantonio Malagoli Tagliazucchi <guidantonio.malagolitagliazucchi at unimore.it>

Maintainer: Guidantonio Malagoli Tagliazucchi <guidantonio.malagolitagliazucchi at unimore.it>

Citation (from within R, enter citation("SVM2CRM")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("SVM2CRM")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SVM2CRM")

biocViews	ChIPSeq, ChipOnChip, Preprocessing, Software, SupportVectorMachine
Version	1.0.0
In Bioconductor since	BioC 3.1 (R-3.2) (1 year)
License	GPL-3
Depends	R (>= 3.2.0), LiblineaR, SVM2CRMdata
Imports	AnnotationDbi, mclust, GenomicRanges, IRanges, zoo, squash, pls, rtracklayer, ROCR, verification
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	SVM2CRM_1.0.0.tar.gz
Windows Binary	SVM2CRM_1.0.0.zip
Mac OS X 10.6 (Snow Leopard)	SVM2CRM_1.0.0.tgz
Mac OS X 10.9 (Mavericks)	SVM2CRM_1.0.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/SVM2CRM/tree/release-3.1
Package Short Url	http://bioconductor.org/packages/SVM2CRM/
Package Downloads Report	Download Stats

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